Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902504.1_cds_XP_016452544.1_46774
CDS Infomation

[gene=LOC107777079] [db_xref=GeneID:107777079] [protein=carbon catabolite repressor protein 4 homolog 1-like] [protein_id=XP_016452544.1] [location=complement(join(77034..77179,77346..77493,77698..77812,77950..78041,78123..78176,79615..79701,79796..79882,79979..80062,80136..80222,80704..81454,86277..86440))] [gbkey=CDS]
Sequence

ATGCTGAGTGTGGTGCGGGTGCATCTCCCATCGGACATTCCAATAGTAGGCTGTGAACTT
ACGCCTTATGTTTTGTTGCGCCGTCCCACTGATGCCACCTCACTCCTTTCTGATGATATC
CCTGAATCTGCTCCTCTTCACGGCTGTTTTTTGAGATATAAGTGGTACCGCATACAAAGT
GATAAACAAGTTGCGATCTGCAGCGTCCACCCATCTGAGCAAGCTACATTGCAATGCCTA
GGATGTGTGAAGGCCAAAATCCCTGTTGCCAAGAGTTATCATTGCTCGCCGAAATGTTTC
TCAGATGCATGGCAGCATCATCGTGTTCTGCATGAACGTGCTGCTAGTGCTGTGAATGAA
AACGGAAATGAGGAGGAAGAATTATTTGGGCGATTCAATAGTACAGGATCTGGTGTTAAT
ATGAGCTTGACTTCTTCGCAATCAAGCGGTAGCTTGACAAATGGAACGGCACCATTATAT
CCTGCAGCTGTAGCTCAAAGAAATGGTGGTGAAACTTGGTTTGAAGTTGGACGCTCTAAA
ACTTACACACCATCTGCAGATGATATTGGTCACGTCCTTAAATTTGAATGTGCTGTCATC
GATGCAGAAACCAAATTACCTGTTGGACATGCTAGTACCGTGTTAACGTCTCGAGTGATT
CCAGCTCCATCTCCTACTCCACGTCGCTTGATTTCAGTTAATGGGGCCGATATACCAGTG
CATCTGGACTTAGATAGTCGTTTATCATCTTCAGGAACTTTTACTGTGCTTTCATACAAC
ATTCTGTCTGATGCATATGCAACAAATGAATTGTACAGTTATTGCCCCTCTTGGGCTCTT
ACTTGGACTTATCGAAGACAAAATCTATTGCGTGAAATAGTTGGCTATCGTGCTGACATT
GTTTGCCTTCAAGAGGTTCAGAGTGATCACTTTGAGGAATTCTTCGCTCCTGAGCTGGAC
AAACATGGTTATCAAGCTCTGTTCAAAAGGAAAACAGCTGAGGTGTTTGGTGAAAATATC
AATACCATTGATGGTTGTGCCACATTTTTCCGCCGAGATAGATTTGCACATGTTAAAAAA
TATGAGGTTGAGTTCAATAAAGCTGCTCAATCTTTGACTGAAGCCTTAGTTCCTAGTGCC
CAAAAGAAGACCGCACTAAGTCGTTTGGTTAAGGATAACGTTGCTCTTATTGTGGTTCTG
GAAGCAAAGTTCAATAACCAGGGGATTGACAACCCTGGGAAGCGCCAACTTGTTTGTGTG
GCTAACACACATGTAAATGTTCATCAAGAGTTAAAGGATGTTAAACTTTGGCAGGTTCAC
ACACTTTTAAAAGGACTAGAGAAAATTGCTGCTAGTGCTGACATTCCAATGCTAGTCTGT
GGTGATTTTAACTCAGTCCCCGGAAGTGCTCCTCATGCACTTCTGGCAATGGGGAAAGTT
GATCCAATGCATCCAGATTTAGCAATGGACCCTCTTGGTATTTTGCGTCCAGCCACAAAG
TTGATGCATCAACTGCCATTGGTCAGTGCTTACTCATCCTTCGCCCGAATGCCTGTGATT
CTTGGACTAGAGCAGCAACGGAGGAGGATGGATCCTAGTACCAATGAACCCTTGTTTACA
AACTGCACTAGAGATTTTATTGGGACTCATGATTATATATTCTATTCTGCGGACTCTTTA
ACTGTTGAATCGTTGTTGGAGCTCTTGGACGAGGAAAGCTTGAGAAAAGATACAGCACTT
CCTTCTCCAGAGTGGTCCTCCGATCATATAGCACTCTTAGCTGAGTTTCGCTGCAAGCCT
AGAACTAGACGCTGA

Peptide Sequence

PEP ID

XP_016452544.1
PEP Infomation

PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Nicotiana tabacum]
Sequence

MLSVVRVHLPSDIPIVGCELTPYVLLRRPTDATSLLSDDIPESAPLHGCFLRYKWYRIQS
DKQVAICSVHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHERAASAVNE
NGNEEEELFGRFNSTGSGVNMSLTSSQSSGSLTNGTAPLYPAAVAQRNGGETWFEVGRSK
TYTPSADDIGHVLKFECAVIDAETKLPVGHASTVLTSRVIPAPSPTPRRLISVNGADIPV
HLDLDSRLSSSGTFTVLSYNILSDAYATNELYSYCPSWALTWTYRRQNLLREIVGYRADI
VCLQEVQSDHFEEFFAPELDKHGYQALFKRKTAEVFGENINTIDGCATFFRRDRFAHVKK
YEVEFNKAAQSLTEALVPSAQKKTALSRLVKDNVALIVVLEAKFNNQGIDNPGKRQLVCV
ANTHVNVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKV
DPMHPDLAMDPLGILRPATKLMHQLPLVSAYSSFARMPVILGLEQQRRRMDPSTNEPLFT
NCTRDFIGTHDYIFYSADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCKP
RTRR

Transcript Sequence

Gene sequence data has not been registered.